Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948707.1_cds_XP_016489882.1_80359
CDS Infomation

[gene=LOC107809727] [db_xref=GeneID:107809727] [protein=IQ domain-containing protein IQM3-like] [protein_id=XP_016489882.1] [location=complement(join(25522..26025,26652..26753,27281..27373,27484..27630,27937..28025,28690..28777,28873..28938,36591..36705,36792..37081))] [gbkey=CDS]
Sequence

ATGAAATTCTCTTCATTTCAAATTCCTATATCTTCAATGGAAGTTGAAACTCACGCTCTC
TCCAGTTTTGATCTCATGAACTCCCCGTCTCCTCCTATTAACTCCATTTTAGACACGTCG
TCCGCTGATAATAATGGCCGGAAATGCCAGTGGCCTGACTCCGTCGTCGGAGGTGGGATT
CCAGTGGATAAGACGACGACGCAAGCGGCTATGACAGTGCAGAAGGTTTACAGGAGTTAT
CGCACCCGGCGCATGTTAGCAGACTCTGCTTTGGTTGCTGAAGAGCTCTGGTGGCAAGCG
ATAGATTATGCTCGATTAAACCACAGTACAATTTCTTTCTTCAATTTTCCGACACCGGAG
ACGGCGGCTTCTCGGTGGAATCGCATCACTTTAAATGCTTCCAAGGTTGGAAAGGGATTA
TCCAGAGATGGAAAAGCTCAGAAATTAGCTTTTCAGCACTGGATTAAGGCTATTGACCCA
CGCCACCGATATGGACATAGCTTGCATATGTACTATGAGGAGTGGTGTAAAACTGATGCT
GGTCAGCCCTTCTTCTATTGGTTGGATCTTGGAGATGGCAAAAAGGTTGATCTCAAAGAA
TGTCCAAGATCAAAGCTTCAGAAACAGTGTATTAAGTATCTTGGACCACAAGAGAGAGAA
CATTATGAATATATAGTGGCTGAAGGGAAAATTGTGCATAAACAAACAGGAAATCATCTT
GATACAACCAATGGGTTGCCGGAGGCAAAATGGATTTTTGTAATGAGCACCTCAAAAAAA
CTCTATGCTGGCGAGAAGAAGAGAGGAATATTTCATCATTCCAGCTTTCTTGCTGGTGGG
GCTACTTTAGCTGCTGGAAGACTAGGGGTAACGGATGGGATACTTAAGTCTATTTCAGCA
TATAGTGGGCATTATAGGCCAAATGATGATAGTCTTGACAGCCTTTTATCATTTCTCAAG
GAAAATGGAGTTAACCTAGATGAGGTTAAGATAAGAAAGGTAAAAGAAGACGATGAGAGC
AATGTAGAGGGACAGTCATATGAGAGTCACTCTGTGTCTGAACTTTCAACTGTATCATAT
TCCCCTCTTCAAGTTGATGATCCGATGGAAGAGGAAAAGGACCTTTCCTCGGAATTAATG
AGAAGTCCGCGAGCTCAAGAGACAAGTAGCTATAAGAGAACACTCTCGGGTGGTCTTGAG
AGCCCAAGAGCAGAGGTGCCAACGACTGCAATACTGCAAAGGATCAACTCAAAGAAGTCT
GCAAAGTCGTATCAACTGGGTCATCAACTCTCCCTGGCATGGTCAACGGGTGCTGGTCCA
AGAATTGGCTGCATTGCTGACTACCCTGCTGAACTAAGGCAGCAGGCCTTGGAACTGACT
AACCTCTCACCTAGACCTTGTTCTGCATCATCAACTCCAAGGCCGATTGATGATATTGTA
TCACCTACTTGTCCTTCACCAGTTCTTTGCAATGGTGATGTAACACGCACCTGA

Peptide Sequence

PEP ID

XP_016489882.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM3-like [Nicotiana tabacum]
Sequence

MKFSSFQIPISSMEVETHALSSFDLMNSPSPPINSILDTSSADNNGRKCQWPDSVVGGGI
PVDKTTTQAAMTVQKVYRSYRTRRMLADSALVAEELWWQAIDYARLNHSTISFFNFPTPE
TAASRWNRITLNASKVGKGLSRDGKAQKLAFQHWIKAIDPRHRYGHSLHMYYEEWCKTDA
GQPFFYWLDLGDGKKVDLKECPRSKLQKQCIKYLGPQEREHYEYIVAEGKIVHKQTGNHL
DTTNGLPEAKWIFVMSTSKKLYAGEKKRGIFHHSSFLAGGATLAAGRLGVTDGILKSISA
YSGHYRPNDDSLDSLLSFLKENGVNLDEVKIRKVKEDDESNVEGQSYESHSVSELSTVSY
SPLQVDDPMEEEKDLSSELMRSPRAQETSSYKRTLSGGLESPRAEVPTTAILQRINSKKS
AKSYQLGHQLSLAWSTGAGPRIGCIADYPAELRQQALELTNLSPRPCSASSTPRPIDDIV
SPTCPSPVLCNGDVTRT

Transcript Sequence

Gene sequence data has not been registered.